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Bioinformatics (Group)

Parent Units:
Max Planck Institute of Molecular Cell Biology and Genetics (MPI-CBG)
German name: "Bioinformatik".

Contact

web: https://www.mpi-cbg.de/en/services-facilities/core-facilities/scientific-computing-facility/services/bioinformatics/
email: e-mail
phone: +49 351 210-2543
fax: +49 351 210-1689
address: Max Planck Institute of Molecular Cell Biology and Genetics (MPI-CBG), Bioinformatics, Pfotenhauerstr. 108, 01307 Dresden, Germany
partner: Max Planck Institute of Molecular Cell Biology and Genetics

Expertise

The bioinformatics team assists MPI-CBG scientists with a wide range of bioinformatics data analysis tasks. Services range from small scale single gene or protein characterization up to global studies involving deep sequencing technologies. The Bioinformatics team provides high-profile bioinformatics support to advance biological research. We develop custom-based bioinformatics tools and provide an integrated bioinformatics-tools platform for non-expert users.

 

Typical Service Requests:

  1. Sequence Analysis
    • Protein sequence analysis & functional prediction
    • DNA/RNA sequence analysis
    • Multiple sequence alignment
  2. Evolutionary Analysis
    • Phylogenetic tree construction
    • Orthologue/Paralogue searching
  3. Structural Analysis
    • Protein structure prediction
    • RNA secondary structure prediction
  4. High Throughput Data Analysis
    • Next generation sequencing analysis (ChIP-Seq, CLiP-Seq, RNA-Seq)
    • Custom microarray design assistance
    • Identification of potential gene candidates for HT screening
    • Annotation of screening hit-lists
  5. Custom Code Development
    • Scripting and small tools (made available through our local Galaxy Server)
    • Data mining and workflow management using KNIME
    • Java plugin development for bioinformatics workbenches such as Geneious/CLC
    • Custom algorithm development upon request

 

 

services

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Affiliations

Parent Units

name type actions
Scientific Computing Facility Facility view

Last Update

Last updated at: 2016-03-30 09:51